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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_38138501_38140270_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38138501 - 38140270

Intron Length:

1770

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATTGAGA

5'SS Class:

major

3'SS Sequence:

TTCTGTCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTGAG

U12 Branch Point Sequence:

TATTCTTTGAGG

Flanking Amino Acid:

DKVAFTGSTEVGKLIKEAAG

Intron Amino Acid Position:

239

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.1

64.2

41.4

Major BPS

60.1

0.25

1.6

60.7

45.9

Major PPT

82.7

0.74

0.7

81.2

30.9

Minor 5ss

37.8

-1.4

3.1

49.1

46.7

Minor BPS

62.1

0.24

1.7

67.06

41.1

Associated Gene:

Gene:

ALDH1A1

Ensembl Gene ID:

ENSAPLG00000004796

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025539

38113896 - 38152521

38626

ENSAPLT00000004994

38114815 - 38150888

36074