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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_38141084_38145551_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38141084 - 38145551

Intron Length:

4468

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTCATTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TATCTTTTCATT

Flanking Amino Acid:

LLPGVQQGPQIDKEQFQKIL

Intron Amino Acid Position:

335

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

89.8

22.2

Major BPS

100

1.24

0.5

100

Major PPT

82.1

0.72

0.8

28.8

Minor 5ss

39.1

-1.2

2.8

51.7

39.1

Minor BPS

54.4

0.22

1.7

73.66

37.7

Associated Gene:

Gene:

ALDH1A1

Ensembl Gene ID:

ENSAPLG00000004796

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025539

38113896 - 38152521

38626

ENSAPLT00000004994

38114815 - 38150888

36074