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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_38145717_38147288_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38145717 - 38147288

Intron Length:

1572

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAGAAA

5'SS Class:

strong_major

3'SS Sequence:

GTGTTTGAAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TGTGTTTGAAAC

Flanking Amino Acid:

TDDMRIAKEEIFGPVQQIMK

Intron Amino Acid Position:

390

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

77.3

32.6

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

63.2

0.3

1.1

58.7

45.5

Minor 5ss

30.9

-2.2

3.2

46.4

Minor BPS

49.2

-0

1.6

60.64

38.5

Associated Gene:

Gene:

ALDH1A1

Ensembl Gene ID:

ENSAPLG00000004796

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025539

38113896 - 38152521

38626

ENSAPLT00000004994

38114815 - 38150888

36074