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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_38147447_38148724_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38147447 - 38148724

Intron Length:

1278

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTCAT

5'SS Class:

strong_major

3'SS Sequence:

CCTATTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTCAT

U12 Branch Point Sequence:

ATTTTCCTATTC

Flanking Amino Acid:

FAAALQAGTVWVNCYSAMSA

Intron Amino Acid Position:

442

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

79.7

35.3

Major BPS

68.2

0.45

1.1

69.4

37.7

Major PPT

81.5

0.71

0.8

72.7

37.4

Minor 5ss

-1.6

47.1

42.6

Minor BPS

52.5

0.06

1.9

68.95

36.7

Associated Gene:

Gene:

ALDH1A1

Ensembl Gene ID:

ENSAPLG00000004796

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025539

38113896 - 38152521

38626

ENSAPLT00000004994

38114815 - 38150888

36074