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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_38425227_38425999_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38425227 - 38425999

Intron Length:

773

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCC|GTAAGTAGC

5'SS Class:

major

3'SS Sequence:

TTGATTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTGAT

U12 Branch Point Sequence:

TTATTCTTGATT

Flanking Amino Acid:

KCGKEEEIVIPIDKGQDRSE

Intron Amino Acid Position:

108

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.8

0.47

1.3

67.4

Major BPS

83.8

0.84

73.6

41.8

Major PPT

82.5

0.73

0.9

77.4

36.8

Minor 5ss

37.9

-1.4

2.7

50.5

39.2

Minor BPS

77.1

0.93

87.14

32.1

Associated Gene:

Gene:

C9orf85

Ensembl Gene ID:

ENSAPLG00000018534

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046237

38425052 - 38438305

13254