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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_38488433_38493295_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38488433 - 38493295

Intron Length:

4863

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

CTTCATATTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

TTTCACTTCATA

Flanking Amino Acid:

LGIASKYAPDENCPDQNPRL

Intron Amino Acid Position:

109

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.2

29.3

Major BPS

81.6

0.78

0.8

24.9

Major PPT

79.9

0.67

0.9

73.6

35.2

Minor 5ss

-0.8

2.8

56.6

41.9

Minor BPS

56.7

0.2

1.9

73.87

37.8

Associated Gene:

Gene:

CEMIP2

Ensembl Gene ID:

ENSAPLG00000014669

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015334

38488108 - 38524823

36716