Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_38510705_38513333_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38510705 - 38513333

Intron Length:

2629

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGGAT

5'SS Class:

strong_major

3'SS Sequence:

TTATCTGTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

GTATTTTTATAT

Flanking Amino Acid:

REYLCLDNNARFRPHQDADP

Intron Amino Acid Position:

723

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

75.4

34.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

77.5

0.62

0.9

72.1

37.7

Minor 5ss

30.2

-2.3

3.7

45.9

49.3

Minor BPS

53.5

0.19

1.7

70.36

40.5

Associated Gene:

Gene:

CEMIP2

Ensembl Gene ID:

ENSAPLG00000014669

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015334

38488108 - 38524823

36716