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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_38517328_38517809_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38517328 - 38517809

Intron Length:

482

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

GTTTCTTTAAAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GTTTCTTTAAAA

Flanking Amino Acid:

NISLVKFGPNPFFGKPGPWF

Intron Amino Acid Position:

891

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.85

0.9

86.1

24.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

69.6

0.44

1.1

71.8

37.2

Minor 5ss

46.2

-0.4

2.8

62.8

Minor BPS

76.8

0.84

1.3

81.56

33.1

Associated Gene:

Gene:

CEMIP2

Ensembl Gene ID:

ENSAPLG00000014669

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015334

38488108 - 38524823

36716