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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_38521895_38522997_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38521895 - 38522997

Intron Length:

1103

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTGAGTATT

5'SS Class:

major

3'SS Sequence:

TTCTCCCATTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAAGAA

U12 Branch Point Sequence:

TCTTCTCCCATT

Flanking Amino Acid:

LSRGQQAFISVNDTTFSFKD

Intron Amino Acid Position:

1197

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

80.3

34.1

Major BPS

58.2

0.21

1.1

55.4

40.4

Major PPT

80.1

0.68

0.8

29.7

Minor 5ss

39.1

-1.2

3.1

61.3

Minor BPS

45.1

-0.3

2.2

68.25

43.4

Associated Gene:

Gene:

CEMIP2

Ensembl Gene ID:

ENSAPLG00000014669

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015334

38488108 - 38524823

36716