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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_38730327_38862453_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38730327 - 38862453

Intron Length:

132127

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGGTGA

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTTAA

U12 Branch Point Sequence:

CTTAAGGTATTT

Flanking Amino Acid:

AFLPSVRLLKAQKSWIERAF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.7

66.8

41.3

Major BPS

58.3

0.21

1.1

49.4

37.6

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

-1.7

3.4

47.2

48.2

Minor BPS

35.5

-1

2.6

56.89

Associated Gene:

Gene:

TRPM3

Ensembl Gene ID:

ENSAPLG00000009788

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010284

38730048 - 39010154

280107