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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_38870811_38873723_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38870811 - 38873723

Intron Length:

2913

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACAGCA

5'SS Class:

major

3'SS Sequence:

TTTTTTTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTCTAT

U12 Branch Point Sequence:

GCATCCACACCT

Flanking Amino Acid:

AWIFTGGVNTGVIRHVGDAL

Intron Amino Acid Position:

260

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

1.1

68.7

36.4

Major BPS

0.37

1.3

64.5

42.5

Major PPT

95.2

1.02

0.5

28.1

Minor 5ss

36.3

-1.6

3.3

48.6

47.1

Minor BPS

45.4

-0.2

2.1

63.09

46.2

Associated Gene:

Gene:

TRPM3

Ensembl Gene ID:

ENSAPLG00000009788

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010284

38730048 - 39010154

280107