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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_38873849_38887199_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38873849 - 38887199

Intron Length:

13351

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGCCCT

5'SS Class:

major

3'SS Sequence:

CTCTAAAATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAA

U12 Branch Point Sequence:

TGTCTCTAAAAT

Flanking Amino Acid:

ENQEDLIGKDVVRPYQTMSN

Intron Amino Acid Position:

302

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

1.1

68.3

42.6

Major BPS

0.57

73.6

28.6

Major PPT

66.6

0.37

59.6

39.5

Minor 5ss

42.9

-0.8

3.1

62.7

41.6

Minor BPS

56.1

0.27

1.8

75.29

Associated Gene:

Gene:

TRPM3

Ensembl Gene ID:

ENSAPLG00000009788

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010284

38730048 - 39010154

280107