Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_38964029_38964947_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38964029 - 38964947

Intron Length:

919

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGATTTT

5'SS Class:

major

3'SS Sequence:

CCCTCTGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCAAAT

U12 Branch Point Sequence:

TGTGGCCTAACA

Flanking Amino Acid:

DISQELNHNSRDFGQLAVEL

Intron Amino Acid Position:

732

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

77.2

33.9

Major BPS

68.5

0.46

73.3

28.9

Major PPT

77.4

0.62

0.9

71.4

32.9

Minor 5ss

38.6

-1.3

3.4

57.3

47.4

Minor BPS

49.7

-0

2.2

68.79

43.3

Associated Gene:

Gene:

TRPM3

Ensembl Gene ID:

ENSAPLG00000009788

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010284

38730048 - 39010154

280107