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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_38982847_38987873_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38982847 - 38987873

Intron Length:

5027

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TCATGACATTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAT

U12 Branch Point Sequence:

CCTCTCATGACA

Flanking Amino Acid:

GPYVMMIGKMMIDMMYFVII

Intron Amino Acid Position:

1039

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

78.7

29.9

Major BPS

82.6

0.81

0.9

83.3

27.7

Major PPT

67.5

0.39

63.4

42.1

Minor 5ss

32.9

-1.9

2.9

37.3

41.2

Minor BPS

49.7

-0

1.6

60.17

39.8

Associated Gene:

Gene:

TRPM3

Ensembl Gene ID:

ENSAPLG00000009788

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010284

38730048 - 39010154

280107