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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39080054_39082876_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39080054 - 39082876

Intron Length:

2823

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTGGC

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTTCCCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

GCAATCTTGACT

Flanking Amino Acid:

TSQYFLVTPKLLQNLTYNDK

Intron Amino Acid Position:

1026

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

72.3

37.8

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

84.3

0.77

0.8

77.2

37.1

Minor 5ss

39.1

-1.2

3.1

52.5

44.7

Minor BPS

60.8

0.42

1.3

68.95

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009355

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009786

39079886 - 39120204

40319