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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39087860_39088533_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39087860 - 39088533

Intron Length:

674

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTATGTACA

5'SS Class:

major

3'SS Sequence:

TTTGCTCTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATGCAT

U12 Branch Point Sequence:

ATTGCTGTAAAA

Flanking Amino Acid:

DQLLPKEFQTAFQDLPNTLE

Intron Amino Acid Position:

827

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.8

0.42

1.1

66.6

38.4

Major BPS

67.2

0.43

1.4

77.7

37.1

Major PPT

82.4

0.73

0.8

77.7

Minor 5ss

-0.5

2.5

61.8

42.4

Minor BPS

49.1

-0

2.2

66.5

40.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009355

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009786

39079886 - 39120204

40319