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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39102961_39104347_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39102961 - 39104347

Intron Length:

1387

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAG|GCAAGTAGG

5'SS Class:

strong_major

3'SS Sequence:

AATCTATATTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

TTCTTTTTAACC

Flanking Amino Acid:

PEDMDTFLVETRDHQKLRVN

Intron Amino Acid Position:

512

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.5

1.14

0.7

82.9

36.3

Major BPS

87.3

0.93

0.8

36.5

Major PPT

0.38

64.2

41.1

Minor 5ss

24.8

-2.9

3.6

33.4

41.8

Minor BPS

78.9

0.89

1.1

81.25

33.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009355

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009786

39079886 - 39120204

40319