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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39104462_39105805_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39104462 - 39105805

Intron Length:

1344

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TGTATGCGAGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATCAT

U12 Branch Point Sequence:

CTTTTCTTAACT

Flanking Amino Acid:

KTVCEPIMLVINMKDSRHAK

Intron Amino Acid Position:

474

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

78.7

29.9

Major BPS

88.2

0.95

0.9

88.3

28.5

Major PPT

60.7

0.24

1.1

55.4

44.5

Minor 5ss

32.9

-1.9

2.9

37.3

41.2

Minor BPS

87.2

1.25

95.32

31.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009355

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009786

39079886 - 39120204

40319