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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39108159_39111696_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39108159 - 39111696

Intron Length:

3538

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAGGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTGTTGTATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

TCTAATTTAAAT

Flanking Amino Acid:

KILDKKIKCMAGEIKEVSQK

Intron Amino Acid Position:

313

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

79.7

35.3

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

78.4

0.64

73.7

40.9

Minor 5ss

36.1

-1.6

3.1

47.2

42.9

Minor BPS

58.4

0.34

1.7

74.95

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009355

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009786

39079886 - 39120204

40319