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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39118916_39120064_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39118916 - 39120064

Intron Length:

1149

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGAGTGCG

5'SS Class:

major

3'SS Sequence:

CTGTCTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTATAAT

U12 Branch Point Sequence:

TGTTCAAGAAAA

Flanking Amino Acid:

SIVRIFMKNFLTYDICEVRP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.5

0.44

1.1

59.1

39.9

Major BPS

70.1

0.5

1.3

72.3

40.4

Major PPT

84.3

0.77

0.8

76.5

37.6

Minor 5ss

30.5

-2.2

3.2

42.5

44.2

Minor BPS

46.8

-0.2

65.51

39.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009355

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009786

39079886 - 39120204

40319