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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39125046_39125385_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39125046 - 39125385

Intron Length:

340

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTAATTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATT

Flanking Amino Acid:

DILFQAGPCLEVEEIQFSSG

Intron Amino Acid Position:

664

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.2

1.14

0.6

93.2

14.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

82.7

0.74

0.8

75.5

38.4

Minor 5ss

43.8

-0.7

2.8

58.1

46.5

Minor BPS

84.9

1.17

0.8

94.97

24.6

Associated Gene:

Gene:

MAMDC2

Ensembl Gene ID:

ENSAPLG00000009256

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009634

39124479 - 39191388

66910