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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39130580_39132073_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39130580 - 39132073

Intron Length:

1494

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGACCA

5'SS Class:

strong_major

3'SS Sequence:

CATCTCATTATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

CAGTTTTAAACA

Flanking Amino Acid:

TLSLGSCQSADLLPPSPGKC

Intron Amino Acid Position:

498

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

38.2

Major BPS

90.4

0.7

90.2

19.3

Major PPT

72.6

0.51

0.9

34.2

Minor 5ss

32.4

-2

37.8

40.6

Minor BPS

52.2

0.07

1.7

59.06

41.5

Associated Gene:

Gene:

MAMDC2

Ensembl Gene ID:

ENSAPLG00000009256

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009634

39124479 - 39191388

66910