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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39153960_39154900_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39153960 - 39154900

Intron Length:

941

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTGCAATTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATGAA

U12 Branch Point Sequence:

GTGCATTGAACT

Flanking Amino Acid:

EIKITPGYCIECDFEENHLC

Intron Amino Acid Position:

166

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

88.8

Major BPS

67.7

0.44

38.9

Major PPT

77.9

0.63

0.9

71.1

38.6

Minor 5ss

37.5

-1.4

2.8

48.3

41.8

Minor BPS

50.8

0.1

1.7

68.43

41.9

Associated Gene:

Gene:

MAMDC2

Ensembl Gene ID:

ENSAPLG00000009256

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009634

39124479 - 39191388

66910