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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39154986_39155825_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39154986 - 39155825

Intron Length:

840

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCCAA

5'SS Class:

strong_major

3'SS Sequence:

TTATATTGTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

ACACCCTAAAAT

Flanking Amino Acid:

DLTNSTKKYKIVLEGEMGQD

Intron Amino Acid Position:

138

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.9

74.1

38.3

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

77.9

0.63

73.3

41.4

Minor 5ss

37.2

-1.4

48.3

Minor BPS

51.2

0.11

1.8

66.24

43.8

Associated Gene:

Gene:

MAMDC2

Ensembl Gene ID:

ENSAPLG00000009256

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009634

39124479 - 39191388

66910