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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39191217_39191357_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39191217 - 39191357

Intron Length:

141

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGCGGC

5'SS Class:

major

3'SS Sequence:

TGTCCCTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCGTGAC

U12 Branch Point Sequence:

CGTGCCGTGACC

Flanking Amino Acid:

MLRLCLLAAHALRLAGAALL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.67

1.1

61.8

43.5

Major BPS

48.6

-0

1.2

40.4

Major PPT

82.9

0.74

0.8

76.8

31.7

Minor 5ss

37.2

-1.5

3.4

50.7

Minor BPS

48.9

-0.1

2.2

62.08

43.9

Associated Gene:

Gene:

MAMDC2

Ensembl Gene ID:

ENSAPLG00000009256

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009634

39124479 - 39191388

66910