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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39253199_39257612_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39253199 - 39257612

Intron Length:

4414

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGAGCGGC

5'SS Class:

major

3'SS Sequence:

CTTGTTTTTAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATTAT

U12 Branch Point Sequence:

TTGTTTTTAAAG

Flanking Amino Acid:

IRNAFARNPHIDEIGLIPCP

Intron Amino Acid Position:

113

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

1.1

59.6

39.9

Major BPS

76.9

0.67

66.3

40.4

Major PPT

77.1

0.61

77.9

34.4

Minor 5ss

33.7

-1.9

3.4

45.3

43.3

Minor BPS

65.9

0.36

1.4

67.73

40.3

Associated Gene:

Gene:

PTAR1

Ensembl Gene ID:

ENSAPLG00000009255

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009620

39252861 - 39290964

38104