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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39262668_39267307_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39262668 - 39267307

Intron Length:

4640

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTTGC

5'SS Class:

strong_major

3'SS Sequence:

TTATCTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TTTATTTTATCT

Flanking Amino Acid:

NPDFTTAWNVRKELILSGTL

Intron Amino Acid Position:

192

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

73.2

39.3

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

84.8

0.78

0.7

81.3

30.4

Minor 5ss

39.2

-1.2

3.1

52.5

44.7

Minor BPS

65.8

0.57

1.6

83.94

37.1

Associated Gene:

Gene:

PTAR1

Ensembl Gene ID:

ENSAPLG00000009255

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009620

39252861 - 39290964

38104