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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39267413_39270226_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39267413 - 39270226

Intron Length:

2814

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTTTGTGTC

5'SS Class:

major

3'SS Sequence:

ATCGTTTAACCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCATCAT

U12 Branch Point Sequence:

TCATCATTAACA

Flanking Amino Acid:

FPKSPETWIHRRWVLQHLIQ

Intron Amino Acid Position:

227

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.63

1.1

73.5

35.7

Major BPS

75.6

0.64

1.1

76.2

37.5

Major PPT

66.2

0.36

1.1

59.5

44.7

Minor 5ss

39.7

-1.2

3.1

52.8

44.4

Minor BPS

0.69

1.6

77.7

38.7

Associated Gene:

Gene:

PTAR1

Ensembl Gene ID:

ENSAPLG00000009255

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009620

39252861 - 39290964

38104