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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39270441_39277091_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39270441 - 39277091

Intron Length:

6651

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATACTGC

5'SS Class:

major

3'SS Sequence:

CTTTTTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TGGTTTATGACT

Flanking Amino Acid:

LQHVGKLTVKILLDELASTK

Intron Amino Acid Position:

299

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.7

0.49

1.1

59.1

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

89.4

0.89

0.8

29.4

Minor 5ss

49.6

-0

2.6

67.9

43.4

Minor BPS

54.2

0.21

1.6

71.91

39.3

Associated Gene:

Gene:

PTAR1

Ensembl Gene ID:

ENSAPLG00000009255

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009620

39252861 - 39290964

38104