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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39279079_39289840_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39279079 - 39289840

Intron Length:

10762

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGCTAC

5'SS Class:

major

3'SS Sequence:

TGTTTTCTCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCAGAAA

U12 Branch Point Sequence:

GTTTTCTCAAAG

Flanking Amino Acid:

LSTCRDADQARYGAPGCSPT

Intron Amino Acid Position:

504

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.4

0.46

1.2

63.1

Major BPS

46.5

-0.2

1.4

52.2

39.8

Major PPT

73.6

0.53

74.8

Minor 5ss

46.6

-0.3

2.5

59.1

45.8

Minor BPS

58.6

0.13

1.7

65.7

41.6

Associated Gene:

Gene:

PTAR1

Ensembl Gene ID:

ENSAPLG00000009255

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009620

39252861 - 39290964

38104