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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39354091_39364561_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39354091 - 39364561

Intron Length:

10471

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTGAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TTGCCATGTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TATTATTTAATT

Flanking Amino Acid:

SDDQRPLDGDSPSPDSSSPR

Intron Amino Acid Position:

385

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

85.2

25.5

Major BPS

90.7

1.01

0.7

19.9

Major PPT

66.5

0.37

58.8

42.1

Minor 5ss

36.3

-1.6

2.9

46.9

41.8

Minor BPS

73.7

0.82

1.4

86.11

33.6

Associated Gene:

Gene:

APBA1

Ensembl Gene ID:

ENSAPLG00000008905

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009275

39352886 - 39387808

34923