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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39364664_39368086_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39364664 - 39368086

Intron Length:

3423

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGAGTGA

5'SS Class:

major

3'SS Sequence:

GTCTTAATTACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TTTGTCTTAATT

Flanking Amino Acid:

STAEPSTNKESRKSLASFPT

Intron Amino Acid Position:

419

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.9

0.47

1.1

59.9

41.6

Major BPS

0.92

0.9

86.2

29.1

Major PPT

0.61

0.9

69.8

39.4

Minor 5ss

34.1

-1.8

3.6

46.6

48.7

Minor BPS

79.6

1.01

1.2

91.07

32.9

Associated Gene:

Gene:

APBA1

Ensembl Gene ID:

ENSAPLG00000008905

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009275

39352886 - 39387808

34923