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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39371322_39376182_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39371322 - 39376182

Intron Length:

4861

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAAGT

5'SS Class:

strong_major

3'SS Sequence:

CCATGCTAAGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TCTCTGTTTATT

Flanking Amino Acid:

QAQEAVSRIKMAQKLAKSRK

Intron Amino Acid Position:

481

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

0.8

80.6

33.8

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

60.2

0.23

55.2

Minor 5ss

29.7

-2.3

40.4

45.3

Minor BPS

46.5

-0.1

2.3

68.38

42.9

Associated Gene:

Gene:

APBA1

Ensembl Gene ID:

ENSAPLG00000008905

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009275

39352886 - 39387808

34923