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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39378195_39381364_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39378195 - 39381364

Intron Length:

3170

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGGAAT

5'SS Class:

strong_major

3'SS Sequence:

CTCTTCCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTGAC

U12 Branch Point Sequence:

GAATGTTTGACT

Flanking Amino Acid:

MICHVFESEDAQLIAQSIGQ

Intron Amino Acid Position:

583

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

80.7

33.2

Major BPS

68.7

0.47

1.2

63.1

44.5

Major PPT

82.8

0.74

0.7

77.1

24.9

Minor 5ss

36.4

-1.5

3.4

53.2

Minor BPS

54.7

0.23

1.8

69.29

41.6

Associated Gene:

Gene:

APBA1

Ensembl Gene ID:

ENSAPLG00000008905

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009275

39352886 - 39387808

34923