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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39386210_39386833_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39386210 - 39386833

Intron Length:

624

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTAAGTAGC

5'SS Class:

major

3'SS Sequence:

CTTTCTCTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAA

U12 Branch Point Sequence:

ATATCTAGACCC

Flanking Amino Acid:

QLGFSVQNGIICSLMRGGIA

Intron Amino Acid Position:

754

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

1.1

70.9

39.2

Major BPS

70.1

0.5

1.1

69.9

35.3

Major PPT

88.6

0.87

0.7

80.8

31.2

Minor 5ss

38.7

-1.3

2.8

51.8

39.1

Minor BPS

45.8

-0.3

1.9

59.62

Associated Gene:

Gene:

APBA1

Ensembl Gene ID:

ENSAPLG00000008905

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009275

39352886 - 39387808

34923