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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39401080_39402892_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39401080 - 39402892

Intron Length:

1813

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGACTTAA

5'SS Class:

major

3'SS Sequence:

TCTTTGTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

CTCTGTTGATCT

Flanking Amino Acid:

DPVLHCLLPQGPVLSCEAAT

Intron Amino Acid Position:

284

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

1.1

76.3

30.6

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

86.8

0.83

0.8

84.6

30.3

Minor 5ss

39.6

-1.2

2.8

47.2

Minor BPS

45.4

-0.2

2.1

63.81

46.8

Associated Gene:

Gene:

FAM189A2

Ensembl Gene ID:

ENSAPLG00000008627

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008979

39399349 - 39422770

23422