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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39407213_39410662_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39407213 - 39410662

Intron Length:

3450

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATCCA

5'SS Class:

strong_major

3'SS Sequence:

CTGTGTGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAG

U12 Branch Point Sequence:

CCGTGCTGAGGC

Flanking Amino Acid:

FYSYTPRMSRRMLGSDVIPL

Intron Amino Acid Position:

165

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

0.9

36.5

Major BPS

52.2

0.06

1.6

51.1

46.3

Major PPT

75.1

0.56

68.6

Minor 5ss

33.9

-1.8

2.9

42.4

44.3

Minor BPS

38.4

-0.9

2.1

42.23

44.9

Associated Gene:

Gene:

FAM189A2

Ensembl Gene ID:

ENSAPLG00000008627

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008979

39399349 - 39422770

23422