Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39413756_39422713_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39413756 - 39422713

Intron Length:

8958

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTACG

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAC

U12 Branch Point Sequence:

CAGCTGTTAACT

Flanking Amino Acid:

MILLVNLFVLLSVI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

77.1

37.8

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

89.9

0.9

0.7

88.4

28.7

Minor 5ss

36.2

-1.6

2.6

40.8

39.1

Minor BPS

49.4

0.04

2.1

65.8

44.8

Associated Gene:

Gene:

FAM189A2

Ensembl Gene ID:

ENSAPLG00000008627

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008979

39399349 - 39422770

23422