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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39523087_39526415_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

39523087 - 39526415

Intron Length:

3329

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAGTTTGT

5'SS Class:

major

3'SS Sequence:

ACATTATAGGTAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTAACAT

U12 Branch Point Sequence:

TTAACATTATAG

Flanking Amino Acid:

YESHVFHLGFQPSS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.4

0.44

1.1

64.3

42.4

Major BPS

0.52

1.1

77.7

35.3

Major PPT

55.5

0.13

1.1

52.1

41.3

Minor 5ss

40.7

-1

3.2

55.6

43.9

Minor BPS

46.5

-0.4

56.12

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024975

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018608

39522902 - 39526428

3527