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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39525181_39544104_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39525181 - 39544104

Intron Length:

18924

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

ATTTTACTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAC

U12 Branch Point Sequence:

AAATTATTACCT

Flanking Amino Acid:

EYVHIPDSIVKHCSA*

Intron Amino Acid Position:

2842

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.9

35.3

Major BPS

77.8

0.69

0.9

69.4

37.3

Major PPT

80.5

0.69

0.8

75.2

34.1

Minor 5ss

36.1

-1.6

3.3

49.5

41.2

Minor BPS

50.8

0.1

1.9

69.52

40.8

Associated Gene:

Gene:

PRUNE2

Ensembl Gene ID:

ENSAPLG00000020377

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033511

39525165 - 39627927

102763