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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39537625_39544104_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39537625 - 39544104

Intron Length:

6480

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTAATATATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TCTTTTTTAATA

Flanking Amino Acid:

EYVHIPDSIVNIDMTLK*

Intron Amino Acid Position:

2842

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.9

35.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

75.7

0.58

0.9

70.7

Minor 5ss

36.1

-1.6

3.3

49.5

41.2

Minor BPS

0.81

1.1

33.3

Associated Gene:

Gene:

PRUNE2

Ensembl Gene ID:

ENSAPLG00000020377

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044855

39537603 - 39627927

90325