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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39544204_39547909_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39544204 - 39547909

Intron Length:

3706

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTAGT

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTGTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGACAT

U12 Branch Point Sequence:

AGTCAATTGACA

Flanking Amino Acid:

TILAVTRPFISSKFSSKIQY

Intron Amino Acid Position:

2809

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.8

83.5

35.1

Major BPS

67.6

0.44

1.2

Major PPT

82.7

0.74

0.9

80.2

37.3

Minor 5ss

43.5

-0.7

2.6

60.2

44.3

Minor BPS

48.7

-0.1

1.8

61.9

36.9

Associated Gene:

Gene:

PRUNE2

Ensembl Gene ID:

ENSAPLG00000020377

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044855

39537603 - 39627927

90325

ENSAPLT00000033511

39525165 - 39627927

102763