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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39547997_39548151_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39547997 - 39548151

Intron Length:

155

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGGGTAGT

5'SS Class:

major

3'SS Sequence:

TTCTTTTTCTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

ACTTTCTTAATG

Flanking Amino Acid:

MKKCYQMIDRRLRKNLKSFI

Intron Amino Acid Position:

2780

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

1.1

69.1

43.2

Major BPS

0.92

0.9

86.2

29.1

Major PPT

87.3

0.84

0.6

88.1

21.7

Minor 5ss

31.1

-2.2

3.1

42.2

44.7

Minor BPS

72.5

0.57

1.3

68.91

39.2

Associated Gene:

Gene:

PRUNE2

Ensembl Gene ID:

ENSAPLG00000020377

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044855

39537603 - 39627927

90325

ENSAPLT00000033511

39525165 - 39627927

102763