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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39550906_39556604_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39550906 - 39556604

Intron Length:

5699

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGAAAA

5'SS Class:

strong_major

3'SS Sequence:

GTTTGTTCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAAAAT

U12 Branch Point Sequence:

TTTGACAAAAAT

Flanking Amino Acid:

EPYKKVISHGGYYGDGLNAI

Intron Amino Acid Position:

2702

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

76.9

33.7

Major BPS

62.8

0.32

1.1

67.9

34.4

Major PPT

78.6

0.64

0.9

72.5

37.8

Minor 5ss

31.4

-2.1

3.1

39.2

46.2

Minor BPS

-0.3

2.2

71.26

Associated Gene:

Gene:

PRUNE2

Ensembl Gene ID:

ENSAPLG00000020377

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044855

39537603 - 39627927

90325

ENSAPLT00000033511

39525165 - 39627927

102763