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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39560408_39561347_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39560408 - 39561347

Intron Length:

940

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGAGAA

5'SS Class:

strong_major

3'SS Sequence:

ACTCTTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTATTACTC

Flanking Amino Acid:

LSPVSTEMRPEPPNSLDLNG

Intron Amino Acid Position:

2576

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

71.7

33.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

83.9

0.76

0.8

30.2

Minor 5ss

30.2

-2.3

3.3

46.2

Minor BPS

0.26

1.8

74.76

36.2

Associated Gene:

Gene:

PRUNE2

Ensembl Gene ID:

ENSAPLG00000020377

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033511

39525165 - 39627927

102763

ENSAPLT00000044855

39537603 - 39627927

90325