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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39561428_39582844_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39561428 - 39582844

Intron Length:

21417

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTATTTCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TATGTTTTATTT

Flanking Amino Acid:

NTERKLSQESGLVQENVGMD

Intron Amino Acid Position:

2549

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

74.9

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

85.2

0.79

0.7

85.1

29.3

Minor 5ss

31.1

-2.2

3.1

31.2

42.7

Minor BPS

54.8

0.23

1.6

71.82

40.2

Associated Gene:

Gene:

PRUNE2

Ensembl Gene ID:

ENSAPLG00000020377

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044855

39537603 - 39627927

90325

ENSAPLT00000033511

39525165 - 39627927

102763