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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39583670_39584119_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39583670 - 39584119

Intron Length:

450

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

CCTTTCATTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TTGCCTTTCATT

Flanking Amino Acid:

PPGGDKESPDEAGTDSLLCR

Intron Amino Acid Position:

2487

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

78.7

29.9

Major BPS

87.6

0.93

0.9

89.3

Major PPT

79.8

0.67

0.8

77.9

29.3

Minor 5ss

32.9

-1.9

2.9

37.3

41.2

Minor BPS

59.2

0.37

1.7

76.76

40.6

Associated Gene:

Gene:

PRUNE2

Ensembl Gene ID:

ENSAPLG00000020377

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044855

39537603 - 39627927

90325

ENSAPLT00000033511

39525165 - 39627927

102763

ENSAPLT00000022085

39582841 - 39671721

88881