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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39590664_39591527_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39590664 - 39591527

Intron Length:

864

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTACC

5'SS Class:

strong_major

3'SS Sequence:

TATTTTTCAACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAA

U12 Branch Point Sequence:

TATTTTTCAACA

Flanking Amino Acid:

YSENLELGNQICCELEECQN

Intron Amino Acid Position:

306

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

81.6

29.9

Major BPS

78.4

0.71

0.9

69.4

37.7

Major PPT

81.4

0.71

0.9

34.9

Minor 5ss

38.7

-1.3

2.7

47.6

34.4

Minor BPS

67.8

0.55

1.4

76.36

34.5

Associated Gene:

Gene:

PRUNE2

Ensembl Gene ID:

ENSAPLG00000020377

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044855

39537603 - 39627927

90325

ENSAPLT00000033511

39525165 - 39627927

102763

ENSAPLT00000022085

39582841 - 39671721

88881