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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39676861_39680519_R

Intron Information:

Intron Rank:

132084

Intron Class:

major

Intron Phase:

Intron Coordinates:

39676861 - 39680519

Intron Length:

3659

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGTAT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TCTTTCTTTACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

77.4

33.4

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

92.2

0.95

0.6

87.4

23.1

Minor 5ss

44.5

-0.6

3.2

63.6

48.1

Minor BPS

0.65

1.6

78.67

37.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018310

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030408

39676424 - 39681620

5197