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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_39702785_39703768_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

39702785 - 39703768

Intron Length:

984

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CCG|GCAAGCCCC

5'SS Class:

major

3'SS Sequence:

AGAGGGGCTACAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GGCAGAG

U12 Branch Point Sequence:

GTCCCGCCAGGC

Flanking Amino Acid:

PGGGAAGGGPAAGAKPALSS

Intron Amino Acid Position:

137

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

1.3

41.5

Major BPS

37.1

-0.8

1.4

26.1

36.2

Major PPT

50.3

0.01

1.1

38.8

Minor 5ss

29.3

-2.4

44.2

43.2

Minor BPS

29.7

-1.5

2.3

37.53

39.9

Associated Gene:

Gene:

FOXB2

Ensembl Gene ID:

ENSAPLG00000006208

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006426

39702376 - 39703938

1563